PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.L01332.1.p
Common NameMIMGU_mgv1a026752mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 486aa    MW: 53158 Da    PI: 8.9802
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.L01332.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.12e-29188247159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dg++WrKYGqK  kg+++pr+YYrCt + +Cpv+k+v+r+ +d +++++tYeg+Hnh+
  Migut.L01332.1.p 188 MNDGCQWRKYGQKISKGNPCPRAYYRCTVSsSCPVRKQVQRCVDDMSILTTTYEGTHNHP 247
                       58**************************999****************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.4E-31173249IPR003657WRKY domain
SuperFamilySSF1182901.1E-26181249IPR003657WRKY domain
PROSITE profilePS5081127.933183249IPR003657WRKY domain
SMARTSM007742.8E-34188248IPR003657WRKY domain
PfamPF031068.4E-26189247IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
REDNLKTAKA KMDRVREENG RLKKTLSHIM KDYDSLKTKF NGLIQENHDV PKKLRNLSPP  60
AVVASDNDDE SDMVSLSLGR SFSGDFTKRD IEKKGSIINR NENNKVSDGL ELGLHSKFHS  120
DNDSTDLSKN LVVPENSSDE SKEDVNDSAR ASDKIPKNSR SGDDEILQHI PLKKPRVSVR  180
ALCNTQTMND GCQWRKYGQK ISKGNPCPRA YYRCTVSSSC PVRKQVQRCV DDMSILTTTY  240
EGTHNHPLPP SAITMASATT AAAAMLKCGS STSPPSHSGA SATSSTSPNN NLLGFNFSSS  300
TSSNYANLNI SHFPKATISS SQSHPTVVLD LTAPNHTTPS PQNNNKFSSR SFAHSSSSSS  360
PTSLNFSSFD TNSIGWESKF PGVNYQPSLY NNFQISQKQT ENDPKIAAIT RDPNFRSALA  420
AAITSIVGTN IVQERNTGLN FHPSFLNKFP QSGNPQQKKN LTQFLPLTMS LADEGEQIEV  480
MNFGI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-20180250275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847734.10.0PREDICTED: probable WRKY transcription factor 72
TrEMBLA0A022QQE20.0A0A022QQE2_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19452464
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18860.11e-57WRKY DNA-binding protein 61